PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 583aa MW: 63087.2 Da PI: 7.9156 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.1 | 2.7e-31 | 234 | 291 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers +++++ei+Y+g+H+h+k PHU12960.1 234 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 291 8****************************************.***************85 PP | |||||||
2 | WRKY | 105.6 | 2.6e-33 | 404 | 462 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ PHU12960.1 404 LDDGYKWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 462 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 583 aa Download sequence |
MANSHAEQLT NGRTSASSAA APGGSNGGGG VAKYKLMTPA MLPISRSTCI TIPPGLSPSS 60 FLESPLLLSN IKAEPSPTTG SFSKFQTVQG SGGAAAFLLT RGYSSSNSYI ERKSSCFEFK 120 NASGSSSTSG SLATEHVIST GFNQQQNDPL KEVQDQSHRQ LLVPSSLAKL EMESSKELSI 180 SASVNVDASS KEESLCQPIN VDAMNPGGPS NASMQGSHAD HKDVSSVTSE RSSDDGYNWR 240 KYGQKLVKGS EFPRSYYKCT YPNCEVKKIF ERSPEGQITE IVYKGSHDHP KPQLCRRFSP 300 GSLVSIQEDK CEKEACFRGQ EDKFNTNVQT NKIEPGCTPV SPQTDTDALE GAASQMQGTN 360 DDIDEDDQFA KRRKMDGGMD VTPVIKPIRE PRVVVQTVSE VDILDDGYKW RKYGQKVVRG 420 NPNPRSYYKC TNAGCPVRKH VERASHDPKA VITTYEGKHN HDVPTARNNN HEMTGSTPVT 480 GGSRIRAEQT NSLSLDLGVG TGYHLDNGNN GQLHTLHNQV QVSRSGMMLV QPGAVVARYG 540 IVHNGMSRFG AIDNRVQGPS FETLPLQPST QSLQSYGKIL LGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.2 | 1e-135 | WRKY family protein |