PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12928.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 129aa MW: 14881.7 Da PI: 5.556 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 54.9 | 2.1e-17 | 2 | 54 | 40 | 92 |
NF-YB 40 sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 s fi +t +a++ c+ +krkt++++d+lwa+ ++G+++y+e l+ yl+ky PHU12928.1 2 SYFIQRITIKANEYCHMNKRKTVTAEDILWAMNNVGLNNYMEFLTDYLHKYHR 54 679************************************************64 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MSYFIQRITI KANEYCHMNK RKTVTAEDIL WAMNNVGLNN YMEFLTDYLH KYHRENSMHY 60 LRPTIVSRST PSSLILPNNS VPMMSYVYAQ FSPNVLLNDS IASVMTNVRN ENMVAENDED 120 PDSSESSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 8e-16 | NF-YB family protein |