PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 239aa MW: 27418.4 Da PI: 6.2216 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 67.1 | 3.4e-21 | 1 | 76 | 17 | 92 |
NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 m+k+lP ++ i +d e +q+ vs fi +t +a++ c+ +krk ++++d++wa+ ++G+++y e l+ yl+ky + PHU12927.1 1 MHKTLPMHTTINDDVVEEIQKIVSYFIHRITIKANEYCHMDKRKIVTAEDIIWAMNNVGLHNYGELLTHYLHKYHQ 76 89************************************************************************86 PP | |||||||
2 | NF-YB | 38 | 3.9e-12 | 129 | 164 | 57 | 92 |
NF-YB 57 ekrktingddllwalatlGfedyveplkvylkkyre 92 + rkt++++d+lwa+ ++G+++yve l+ yl+kyr PHU12927.1 129 NVRKTLTAEDILWAMNNVGLNNYVEFLTDYLHKYRR 164 67********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MHKTLPMHTT INDDVVEEIQ KIVSYFIHRI TIKANEYCHM DKRKIVTAED IIWAMNNVGL 60 HNYGELLTHY LHKYHQENSM HYLRPNIMQP NAPSSLILPI NSVPMMSYGY PHFPPNVLLN 120 DPVAAVMTNV RKTLTAEDIL WAMNNVGLNN YVEFLTDYLH KYRRENSMHY LRPAIVPPST 180 PSSLILPINS VPMMSYVYAQ FLPNVLLNDS VAAVMTNVRN ENMVTENDED PDSSESSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 2e-21 | NF-YB family protein |