PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12861.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 747aa MW: 81158.2 Da PI: 6.3532

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	7e-33	323	380	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k PHU12861.1 323 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSQ-EGHITEIIYKGAHNHPK 380 8**************************************.*************85 PP
2	WRKY	104.1	7.6e-33	538	596	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ PHU12861.1 538 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERASHDLKSVITTYEGKHNHD 596 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDVGSRSTFQ CTNETKSGNL ASGPQENVGT 60 SDGNDEAQAA VSEQQPVSDQ KMNSRGGLLE RMAARAGFNA PKLNTESLRP ADMRQNQGVQ 120 NQGVRSPYLT IPPGLSPTTL LESPVFLTNS LVQPSPTTGK FPFSSGIESR NSTLMMEDPD 180 NRKENAFESI NSSSFSFKPV PETAPSLFPG TNSRSWLQVN PPNFSQQGFP NIEVSVHSQN 240 SLQSHRMEAT QNLVQNGTLN QASDFPRFSA EMDVKGSNVT PESRTFQTVG STVEHSPPLD 300 EPQDEDIGQR GGGDPNVVGA PAEDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE 360 RSQEGHITEI IYKGAHNHPK PPPNRRSALG STNSLGDLRL DGVEQGASGV NGDLGRANIQ 420 KAPGSGGGFD WRSNNLDATS SVNLGSEYCN RSAPFPAQND SQLESGDAVD VSSTFSNDED 480 EDDRGTHGSI SQGYDGEGDE SESKRRKLET YSADMTGATR AIREPRVVVQ TTSEVDILDD 540 GYRWRKYGQK VVKGNPNPRS YYKCTSAGCN VRKHVERASH DLKSVITTYE GKHNHDVPAA 600 RNSSHVNSGA SNTHPTAVTA PAQNHLHRPE PAQLQNAMAR FDRQPSLGSF GLAGRPQLGP 660 TPGFSYGMNP QGLSSLSMAG FHPNQNKPGE VPIHPYLGQP RPMHDMGFIF PKEEPKVEPM 720 SDPGLNLSNG SNVYQQFMNR LPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDVGSRSTFQ CTNETKSGNL ASGPQENVGT  60
SDGNDEAQAA VSEQQPVSDQ KMNSRGGLLE RMAARAGFNA PKLNTESLRP ADMRQNQGVQ  120
NQGVRSPYLT IPPGLSPTTL LESPVFLTNS LVQPSPTTGK FPFSSGIESR NSTLMMEDPD  180
NRKENAFESI NSSSFSFKPV PETAPSLFPG TNSRSWLQVN PPNFSQQGFP NIEVSVHSQN  240
SLQSHRMEAT QNLVQNGTLN QASDFPRFSA EMDVKGSNVT PESRTFQTVG STVEHSPPLD  300
EPQDEDIGQR GGGDPNVVGA PAEDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE  360
RSQEGHITEI IYKGAHNHPK PPPNRRSALG STNSLGDLRL DGVEQGASGV NGDLGRANIQ  420
KAPGSGGGFD WRSNNLDATS SVNLGSEYCN RSAPFPAQND SQLESGDAVD VSSTFSNDED  480
EDDRGTHGSI SQGYDGEGDE SESKRRKLET YSADMTGATR AIREPRVVVQ TTSEVDILDD  540
GYRWRKYGQK VVKGNPNPRS YYKCTSAGCN VRKHVERASH DLKSVITTYE GKHNHDVPAA  600
RNSSHVNSGA SNTHPTAVTA PAQNHLHRPE PAQLQNAMAR FDRQPSLGSF GLAGRPQLGP  660
TPGFSYGMNP QGLSSLSMAG FHPNQNKPGE VPIHPYLGQP RPMHDMGFIF PKEEPKVEPM  720
SDPGLNLSNG SNVYQQFMNR LPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein