PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12814.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 319aa    MW: 36653.2 Da    PI: 7.1564
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.11.8e-33176233259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCts++C+vkk+vers +dp++v++tYeg+Hnh+
  PHU12814.1 176 EDGYRWRKYGQKAVKNSPFPRSYYRCTSQKCSVKKRVERSYQDPSIVITTYEGQHNHH 233
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MSDNNPFHHD YAYPFFGENP SIYDHQVENT QNPHQDFDYP SSYMSSLTEC LHGGSMDHYN  60
SLSSAFGMNH RTSSSEVVCP PPIDHHHHQE LSRKNSVDHH HHQIPLTPNS LISSSSNSEP  120
GCHEEDSSKI KKDDQCEDGG DDDKSKKVNK AKKKGEKKQK EPRFAFMTKS EIDNLEDGYR  180
WRKYGQKAVK NSPFPRSYYR CTSQKCSVKK RVERSYQDPS IVITTYEGQH NHHCPATLRG  240
NAAAALLSPA SFLSSSQQQL FHNPSEQQLF YNPNLPINNS FYNNYHQHQH QMQPQLGPDN  300
YQYGVFQDMV ASLIHKREP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.16e-46WRKY family protein