PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | TCP | ||||||||
Protein Properties | Length: 396aa MW: 43231.4 Da PI: 6.6827 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 120.5 | 2e-37 | 29 | 140 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg..... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai+el+++ +s++a + +++++++++++++ PHU12665.1 29 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKPAIDELAELppwkpniGSDDAGTT--NERNQKQQEDTNNnfafq 125 79**************************************************************877755522222111..111111111111123344 PP TCP 89 ..............k 89 + PHU12665.1 126 qgnaslfddnvagpS 140 444555543222220 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MGETSRLGAR DNNVGEIVEV QGGHIVRSTG RKDRHSKVCT AKGPRDRRVR LSAHTAIQFY 60 DVQDRLGYDR PSKAVDWLIK KAKPAIDELA ELPPWKPNIG SDDAGTTNER NQKQQEDTNN 120 NFAFQQGNAS LFDDNVAGPS SKRAMESSNT ASFLPPSLES DAIADTIKSF FPMGSATSSN 180 SSAMQFHSFQ EPHLLPRTNS QNQDLSLSLQ FQDPILLHHQ NQTNRREQVQ VQPPAHFTGS 240 TPLGFDTSGW SMHHQQTVEL GRVQRVGSWS DSRDTAPGGG GGGGYLFNSP PAPVLLQQLF 300 GQNQVFTQRG PLQSSNTSSI RAWMDPSAIA IASADPSQHH HQAAFPMYQS TIPGYGFASD 360 VGGFSGFRIP ARIQGEEEEH DGISDKPSSA SSDSRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 1e-103 | TCP family protein |