PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SBP | ||||||||
Protein Properties | Length: 169aa MW: 19636.4 Da PI: 8.8625 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.1 | 3.8e-41 | 69 | 143 | 2 | 76 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 Cqve+C +dl ak+y++rhkvC+ h+kap vl++gl+qrfCqqCsrfh +sefD +krsCr+rLa+hn+rrrk PHU12644.1 69 CQVEKCGVDLDGAKKYYKRHKVCQLHAKAPIVLLAGLRQRFCQQCSRFHGISEFDGTKRSCRQRLAGHNQRRRKI 143 *************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MATQIYGRPL KNMAAPMDFV EEDNEFEEED EEEDETVLIG KNSYLKRKKL NLDKKKGEKS 60 DGMQVKQYCQ VEKCGVDLDG AKKYYKRHKV CQLHAKAPIV LLAGLRQRFC QQCSRFHGIS 120 EFDGTKRSCR QRLAGHNQRR RKIPVAVKLE DDQCRQINGE TRPHMDMST |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 86 | KRKKLNLDKKKGEKSDGMQVKQYCQVEKCGVDLDGAKKYYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 3e-37 | SBP family protein |