PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12539.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 432aa MW: 49223.7 Da PI: 5.3492

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.9	1.9e-34	20	110	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+ ++ ++sws+ng+sfvv+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+kv+ e+ weF++++F +g+++ll++i PHU12539.1 20 FLSKTYELVDDAYTNPVVSWSHNGRSFVVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANEEFIRGQRHLLKNIY 107 9*************************************************************9998.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PHU12539.1 108 RRK 110 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MVSIVMENSN GGSSSAPAPF LSKTYELVDD AYTNPVVSWS HNGRSFVVWN PPEFARDLLP 60 KYFKHNNFSS FIRQLNTYGF RKVDPEQWEF ANEEFIRGQR HLLKNIYRRK PIHSHSASGQ 120 SVPPLTDTER QEYEDEIERL KRENRLLQSS AENQEKFNQG YEIGIKSVEQ RLQNVAHRQG 180 KLISLLTQLL QRPEFSSDLI QCTNSNSKKR RLLVSNYLTE EENATTNSVV APKLDLEMVK 240 KLDSSINFWE HFLYGIRMNP TEDQICDFEH PQPLPPQIVI REMDTSSDDS GKRNSPITHS 300 PSPSRDIQSS PEFGGGPLSP VISSIYVNLE CQLKPSDQTN LVINATESQV EGNATKASES 360 VPNSGNDVFW EQFLTERPGC TEPQQVENKD INGLTCDSRL VEDHRYWWNR GFNVENLAER 420 MGHLSSPATT GS

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MVSIVMENSN GGSSSAPAPF LSKTYELVDD AYTNPVVSWS HNGRSFVVWN PPEFARDLLP  60
KYFKHNNFSS FIRQLNTYGF RKVDPEQWEF ANEEFIRGQR HLLKNIYRRK PIHSHSASGQ  120
SVPPLTDTER QEYEDEIERL KRENRLLQSS AENQEKFNQG YEIGIKSVEQ RLQNVAHRQG  180
KLISLLTQLL QRPEFSSDLI QCTNSNSKKR RLLVSNYLTE EENATTNSVV APKLDLEMVK  240
KLDSSINFWE HFLYGIRMNP TEDQICDFEH PQPLPPQIVI REMDTSSDDS GKRNSPITHS  300
PSPSRDIQSS PEFGGGPLSP VISSIYVNLE CQLKPSDQTN LVINATESQV EGNATKASES  360
VPNSGNDVFW EQFLTERPGC TEPQQVENKD INGLTCDSRL VEDHRYWWNR GFNVENLAER  420
MGHLSSPATT GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-80	HSF family protein