PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12509.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 297aa    MW: 31411.8 Da    PI: 6.6226
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.6e-3076133359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY ++Hnh+
  PHU12509.1  76 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSHLDPTMLLITYCSDHNHQ 133
                 99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEDRLYKNSF FHKQEDSTGT PPDNAADSCF SGDEAAEVNM PSPRKSRRGA KRKVISVPII  60
EADGSRSKGE VYPPPDSWSW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSHLDPT  120
MLLITYCSDH NHQLPAATAT ATKHHHTAAG GATSPSTSTG TAVDINPSAA SDTAKKSSPE  180
EQETNIFAGF SEFAGELGWF SDMGTSTLME SASTSATSIV GSTWNDSDVA LMLPIREEDQ  240
SLYGDLGELP ECSFVFRRGL GVGIGGIGGG LGGIDRGIGC GGGGLSVATG GRSVGRY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14753RRGAKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-61WRKY family protein