PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12412.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 307aa MW: 34934.5 Da PI: 6.7022

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.9	1.1e-35	22	130	2	107
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec.....eaesssssasnsssgka 90 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++ + ++ eae+ + +++ +s+ + PHU12412.1 22 TGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLDELppwnpN-----QVpstteEAEDAVLEQQ-PSEY-Q 113 79**************************************************************766541.....33222223333333333.3333.2 PP TCP 91 aksaakskksqksaasa 107 + + ++++++++ +s PHU12412.1 114 LQRELEENNPSHQVNSS 130 22222223333332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MKRATGGGEI VQVEGGHILR STGRKDRHSK VYTAKGPRDR RVRLAAHTAI QFYDVQDRLG 60 YDRPSKAVDW LIKKAKNAID KLDELPPWNP NQVPSTTEEA EDAVLEQQPS EYQLQRELEE 120 NNPSHQVNSS NSYMMQVPST GGEAPQSLGD TMKSFFPMNS GTPLMNFQNY PHEIMPRSSL 180 QNEDLGLSLH TTFHRATSSD NDQNALFSNH QTFEANYPRM ASWNILPQTF FTTQSAFTQR 240 EPLQSNFSQM INHHATWEER PLMNGLIHQA EITNNSRHFT TDFQVPARIH GEHHQDPSSA 300 SPNSHHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-52	TCP family protein