PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12259.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 187aa    MW: 21906.5 Da    PI: 7.0445
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.81.4e-142761844
                     HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     E+el+++++k+lG++ W++Ia +++ gR+++++k++w
       PHU12259.1 27 EEELILKLHKELGNK-WSAIATRLP-GRSDNDVKNHW 61
                     678899*********.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MRCRKSCRLR WMNYLKPGLK KGNYSPEEEL ILKLHKELGN KWSAIATRLP GRSDNDVKNH  60
WDAHHKKRIR LTNANSSTST EKFTESSSSD SKNEQSCNSD EADYDMKEVP ISSDLSNKLN  120
GVTDWIEEED NPTLLGQWKN FQVSIQWNNH FQILFAGQVL LPIFRQTFDT NFWSESLLDN  180
FWTQPFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.19e-22MYB family protein