PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12048.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 526aa    MW: 58352.3 Da    PI: 6.6588
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.8e-29257314260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +DgynWrKYGqK v+g+ f+rsYY+Ct+++C +kk+vers+ d+++++i Y  +H+h+k
  PHU12048.1 257 EDGYNWRKYGQKLVRGNMFTRSYYKCTHPNCLAKKQVERSH-DGHITNIQYITNHEHPK 314
                 7****************************************.***************85 PP
2WRKY1079.6e-34434492159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 l+Dgy+WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++dpk+v++tYeg+H+h+
  PHU12048.1 434 LNDGYRWRKYGQKFVKGNPNPRSYYRCSSAGCPAKKHVERASHDPKLVITTYEGQHEHD 492
                 58********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MSKLNLHRND MIDEGRMGIS EDDMTDEISS RKLKQKQDPD TVINGSESKE KGTCESMSAE  60
VVSNELHKRP NPDALAKVSQ SNRDESAHPT TCQGVWNEGQ PRRNVDKEID VSQSNQKDSS  120
LSNVPEENSE NVHQEKGPES EGGASASSRV SVLPKEEPYI KSCKSDSPVK EGNISLVVGT  180
ASDCSPQIQS KKMEEVVSQS HQERVTYSTM AENAMYKLRP RRNPDTSVQD LPSDEGVRDL  240
PSDQGVTPFS EPEKPFEDGY NWRKYGQKLV RGNMFTRSYY KCTHPNCLAK KQVERSHDGH  300
ITNIQYITNH EHPKPLNSPQ ISNEVVVPSE MRRPDMLMGT PQAEGEKSTA LGQACESIEP  360
LESLISAAVE SAGGSARDTV PKPLKSGDGG DSNGGRNSKR RKKEVPRSDD MTPPMKSHSE  420
PRHIVQTRSE VDILNDGYRW RKYGQKFVKG NPNPRSYYRC SSAGCPAKKH VERASHDPKL  480
VITTYEGQHE HDIPLSRTVA QNSDSNTTRI SGESTSESGG NKHVDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.21e-68WRKY family protein