PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU11919.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 439aa MW: 48575.4 Da PI: 5.1023 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 369.2 | 5.6e-113 | 78 | 436 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 lLl+cAe+v+ ++le a +lL ++ el+sp g++ +R+aayf+eAL+ar+ +s + y+ ++ ++ + ++s++ ++al+ ++ +sP++kfsh taNqa PHU11919.1 78 GLLLQCAECVAMENLEDAGNLLPEIAELSSPFGSSAERVAAYFAEALSARIISSHLRFYSPINLKALTLTHSQKLFTALQSYNTLSPLIKFSHYTANQA 176 58************************************************************************************************* PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200 I++a+e e++vHiiD+di+qGlQWp L+q L+sR+++ s++iTgvgs s e le+tg+rLa+fA+++g+pfef++l k + +l++L vk +E PHU11919.1 177 IYQALECEDHVHIIDLDIMQGLQWPGLFQILSSRSRKLRSIKITGVGS----SMELLESTGRRLAEFANSFGLPFEFKPLEGKIGHVRNLSQLGVKAEE 271 ************************************************....***************************8777777779********** PP GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299 a++Vn+++ h l+d ++s + +l+ l+Pk+++ veqe++h ++sFl rf+eal+yysalfd+l +l++es er++vE++l+g ei+n+va PHU11919.1 272 AIVVNWMH--HCLYDVTGSDLG----TFRLLTLLRPKLITTVEQELSH-GGSFLGRFVEALHYYSALFDALGDGLGEESVERHMVEQQLFGSEIRNIVA 363 *******9..888888888888....99********************.789*********************************************** PP GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 g +r + e+W + l+++GF pv+ls + a+qa+lll +++ +gy++ ee+g+l lgWkd +L+++SaW+ PHU11919.1 364 VGGPKRSGEV-PIERWGDELKRVGFLPVSLSGTPAAQASLLLGMFP-RGYTLVEENGCLKLGWKDLSLLTASAWQ 436 ****977665.6**********************************.***************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 439 aa Download sequence |
MLYSLQISFI NHTTISLSSS TMSSKRSIVE FTPPATDEDP VFTKRPRHFP SSEREEDEEE 60 GEEVVPVDAD SIGLRLLGLL LQCAECVAME NLEDAGNLLP EIAELSSPFG SSAERVAAYF 120 AEALSARIIS SHLRFYSPIN LKALTLTHSQ KLFTALQSYN TLSPLIKFSH YTANQAIYQA 180 LECEDHVHII DLDIMQGLQW PGLFQILSSR SRKLRSIKIT GVGSSMELLE STGRRLAEFA 240 NSFGLPFEFK PLEGKIGHVR NLSQLGVKAE EAIVVNWMHH CLYDVTGSDL GTFRLLTLLR 300 PKLITTVEQE LSHGGSFLGR FVEALHYYSA LFDALGDGLG EESVERHMVE QQLFGSEIRN 360 IVAVGGPKRS GEVPIERWGD ELKRVGFLPV SLSGTPAAQA SLLLGMFPRG YTLVEENGCL 420 KLGWKDLSLL TASAWQPCD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41920.1 | 1e-157 | GRAS family protein |