PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11881.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 319aa    MW: 37537.8 Da    PI: 6.6758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.47e-05205226930
                 HHHHHHHHHHHHHHHHCTSCCC CS
         HLH   9 ErrRRdriNsafeeLrellPka 30 
                  rrRR+ + s++++L ++lP+ 
  PHU11881.1 205 SRRRRSGLSSKIQRLAKILPTY 226
                 59******************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVYSSVATGA ENNVHGEEES FKRDDPNANS LSAEELVKTF CIDYYPVRMT CDGATDLTGD  60
LVVKSIMGKY FDAFKKILRE QKLDSYFRKN CFGQYLDLPE DNNARFQMKM VYDLLKRRKQ  120
NGETYKVNES SPGFDMFDFI VAHPEMKNWF YLMSQPQTCW NDEHIDIIFY YLQKMAKFQT  180
QEQYRYTTAV IILKERHIRV YDLMSRRRRS GLSSKIQRLA KILPTYLDMS GFLNQKVRTD  240
WSTIEAYWDK MGNPFDVQYV DEIAQQIIGS LDCGPFVTAY AKYLSDGLLV PNDELDAGLL  300
HKRYVALLWK YEEDVRNRR