PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU11699.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 513aa MW: 56820.4 Da PI: 7.239 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 54.2 | 2.7e-17 | 333 | 379 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L++llP++ +K +Ka++L +A+eY+ksLq PHU11699.1 333 VHNLSERRRRDRINEKMKALQDLLPHS-----TKTDKASMLDEAIEYLKSLQ 379 6*************************9.....9******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 513 aa Download sequence |
MNPCLPEWNI EAEQPVPHQK KPMGFDHELV ELLWRNGEVV LHSQTHKKQP GYNPNECRHF 60 DKHVQPTIRV AGDQTNLLQD DETVSWLNCP IDDSFDKVFC SPFLSDISTA PLREADKSIR 120 QSEDNKVFKF DPLEINHVLP QSHHSGFDPN PMPPPRFNNF GSAQQQHHIG GNQKGVNFPP 180 PVRSSNMQLG GKEARSNLML QDIKEGSVMT VGSSHCGSNQ VAVDADTSRF SSSANRGLSA 240 ALITDYTGKI SPQSDTMDRD TFEPANTSSS GGSGSSYARA FNQSTATNSQ NHKRKSRDGE 300 EPECQSKADG LESAGGNKAQ KSGTARRSRA AEVHNLSERR RRDRINEKMK ALQDLLPHST 360 KTDKASMLDE AIEYLKSLQM QLQMMWMGSG MASLMFPGVQ HYMSRMGMGI SPQTVPSIHN 420 AMHLARLPLV DPSIPLTQAA PNQAAMCQNS MLNQVNYQRH LQNPNFQDQY ASYMGFHPLQ 480 GASQPMNIFG LGSHTAQQSQ QLPHPTNSNA PTT |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 338 | 343 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59060.1 | 1e-43 | bHLH family protein |