PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11586.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 402aa MW: 44977.1 Da PI: 9.7429

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.3e-14	232	277	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ Lr+llP+a +K +Ka++L ++eY++sL PHU11586.1 232 HHMISERRRREKLNDSFQLLRSLLPPA-----TKKDKASVLASTTEYLSSL 277 68899*******************9.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MACSIGEIEF GMTSSHQVNL ELGMKHLFPE YLSSPAAAAA ISGFPHHQPL LSMDQNRPSS 60 SSSFSLDSPG EYSSLLFNVA SASYVPEPPR VDAFPEQTIR PVSATAMPYH QQQAIQTTIT 120 QTQIRGIQLP RVETEDAALT RAYLAVMTSP SSSSSSHQSR EHNEPTDHYQ KPTAFRRFRS 180 GLGPNYVQIA AKTTRRENML RRSITFFRNL NMMRRQEQIQ TNPRAPTSTQ VHHMISERRR 240 REKLNDSFQL LRSLLPPATK KDKASVLAST TEYLSSLKGQ VEELSKKNEM LEAQLVKPQM 300 RSNAIISSCA YDGNERVAVE IINVGKSTSE SRIADLQVSV RGECSVLDLV TRLLQFLKTD 360 SNLTLESAAA NTRPMVTHIT LRIRIEVYFF SFPKLTALTN SI

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MACSIGEIEF GMTSSHQVNL ELGMKHLFPE YLSSPAAAAA ISGFPHHQPL LSMDQNRPSS  60
SSSFSLDSPG EYSSLLFNVA SASYVPEPPR VDAFPEQTIR PVSATAMPYH QQQAIQTTIT  120
QTQIRGIQLP RVETEDAALT RAYLAVMTSP SSSSSSHQSR EHNEPTDHYQ KPTAFRRFRS  180
GLGPNYVQIA AKTTRRENML RRSITFFRNL NMMRRQEQIQ TNPRAPTSTQ VHHMISERRR  240
REKLNDSFQL LRSLLPPATK KDKASVLAST TEYLSSLKGQ VEELSKKNEM LEAQLVKPQM  300
RSNAIISSCA YDGNERVAVE IINVGKSTSE SRIADLQVSV RGECSVLDLV TRLLQFLKTD  360
SNLTLESAAA NTRPMVTHIT LRIRIEVYFF SFPKLTALTN SI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	ERRRRE
2	238	243	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	5e-40	bHLH family protein