PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU11351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 109aa MW: 12322.4 Da PI: 10.133 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 39.6 | 6.8e-13 | 5 | 45 | 5 | 45 |
SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 n++ sk ++ + KKA+ELS+LC++e+a+iifs +g+ PHU11351.1 5 NSRAEDMKISKMQKSLCKKANELSILCGIEIAIIIFSISGQ 45 5555566679999************************8885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MEKKNSRAED MKISKMQKSL CKKANELSIL CGIEIAIIIF SISGQPILFG KPDVESVVHH 60 FLEAKHPAAL RNYMKMKKKE GRKKKKEKGK SIEGNSDDFE SPSEFAPKD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 87 | RKKKKE |
2 | 82 | 88 | RKKKKEK |