PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11283.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 367aa    MW: 40459.4 Da    PI: 4.4774
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-183787155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr++  +g+WvAeIr+p   + r + ++lg+f+  ++Aa a++aa++kl+g
  PHU11283.1 37 CKYKGVRQRT-WGKWVAEIREP---N-RgACVWLGTFDNSYDAAVAYDAAALKLYG 87
                79*****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MSSKFSLSPQ RRSKKPTQAT SRKGRMKGKG GPENATCKYK GVRQRTWGKW VAEIREPNRG  60
ACVWLGTFDN SYDAAVAYDA AALKLYGPDK AQLNLPHLYN IPAQAQHESS RPAVTPTPAP  120
APVPADPSPS IYNVASPSTW NVKNDPSVYF NNDFSSTDFS ATSISLDMNE KADHEEFVEN  180
VSSRPAPTLA PAPFSLVPSQ SVYNVASPST WNVENDPSLY FNNDFSSTDF SATSFSLDMN  240
EKADHEEFVK NESSRPAPTP AAAPVSLVPS PSIYNVASPS TWNVEIDPSL YFNNDFEIDP  300
SLYFNNDFAS TDFSATSFSL DMNEKADHEE FVEKNNQISK ELGEDMWSDL NLLPEIDDTY  360
HRMGGGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-33ERF family protein