PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11151.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 456aa MW: 49741.8 Da PI: 9.1813

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.5	1.5e-24	147	203	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYYrCt+ +C++kk +e+s + ++v+ei+Y++eHnh+ PHU11151.1 147 RDGYNWRKYGQKQVKSPQGTRSYYRCTHFECCAKK-IECSGHTNRVMEIIYRSEHNHD 203 7******************************98.*******************7 PP
2	WRKY	95.7	3.1e-30	319	376	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++pr+YYrC+sagCpv+k++er+ + + +++itY+g H+h+ PHU11151.1 319 SDGYRWRKYGQKMVKGNPHPRNYYRCSSAGCPVRKHIERAVDSTIALTITYKGVHDHD 376 7**************************************99999*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MAGVTESSKF TGTNKSSHKI ENGVIDIDKG VNGAENLQSE SQLSEVPVEY EMPPFSLTKK 60 IKDRISVTRP GTMNAQARTK HQQRVPDESS TLELSSTSVA QSISSVPSPT LAESRLSAVV 120 NCGTGEVAKQ SSDAKVQPLV PVKTSNRDGY NWRKYGQKQV KSPQGTRSYY RCTHFECCAK 180 KIECSGHTNR VMEIIYRSEH NHDPPPSVTC SRESKSAILS ASTNGKSLID HPNRNSNETV 240 ASSFKENLQE SLPIAETANL DSGGSDTDTE INIKEEHSDE PEQKKRSRKS DASCSESVSK 300 PGKKPKLVVH AACDVGISSD GYRWRKYGQK MVKGNPHPRN YYRCSSAGCP VRKHIERAVD 360 STIALTITYK GVHDHDMPVP KRRHGPPSAP LIAAAAAPAS ITDMKKPEPL QHQKSTTQWS 420 VDKQGELTSE KLDLGGGKAM GSARTLLSIG FEIKPC

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MAGVTESSKF TGTNKSSHKI ENGVIDIDKG VNGAENLQSE SQLSEVPVEY EMPPFSLTKK  60
IKDRISVTRP GTMNAQARTK HQQRVPDESS TLELSSTSVA QSISSVPSPT LAESRLSAVV  120
NCGTGEVAKQ SSDAKVQPLV PVKTSNRDGY NWRKYGQKQV KSPQGTRSYY RCTHFECCAK  180
KIECSGHTNR VMEIIYRSEH NHDPPPSVTC SRESKSAILS ASTNGKSLID HPNRNSNETV  240
ASSFKENLQE SLPIAETANL DSGGSDTDTE INIKEEHSDE PEQKKRSRKS DASCSESVSK  300
PGKKPKLVVH AACDVGISSD GYRWRKYGQK MVKGNPHPRN YYRCSSAGCP VRKHIERAVD  360
STIALTITYK GVHDHDMPVP KRRHGPPSAP LIAAAAAPAS ITDMKKPEPL QHQKSTTQWS  420
VDKQGELTSE KLDLGGGKAM GSARTLLSIG FEIKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-100	WRKY family protein