PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10764.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 920aa MW: 102399 Da PI: 6.8832

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	5.9e-29	617	667	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ PHU10764.1 617 EKSISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 667 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MEDGAFTLND MLAKLSDNTT ATDFSFMGEF LSDGFWLEAT DQGSNYFCNQ PALPFTSTSS 60 LPSQPLSFDT NVSIPSTNQV AFQQETEKDK IADNLFVPQM DESSAPTRDN THTSPRPDSS 120 AFQVEGTQMN RRLWIGPNTL TNPNPTLSVK TRLVQAIEYL KNSTRDKDVL IQIWVPVKRG 180 GKHVLVTNNQ PYFINPNSQS LLEYRYVSQN YQFAAEKDSK ELVGLPGRVF LKKLPEWTPD 240 VRFFKREEYP RVNYAHQHNV RGSIAVPVFE SGSGTCLGVV EIVTTIQKTH YHPELEDVCK 300 ALEAVNLRSS GISSNPAKVK DCNESYLAAL AEIQYILTCV CDTHKLPLAQ TWAPCIQQGK 360 GGCLQSDEHF ASCVSTVDSA CYVRDPQVVP FHFACSEYHL LKGEGVAGGA FNTNQPCFAT 420 DITAFSKAEY PLSHHARMFG LCSAVAIRLR SIYTGSADFV LEFFLPLDCK NTEDQKQMLS 480 SLSSVIQQSC RSLRVVTDQE LQEEKVSLSV GGSHEEEARK PVSPSYRDQD SSSWLSEMMD 540 AQRKGKGAAV SENHRDKQEE NFKVTATPWD YTQKEPIHAS TFSEPNQSFV AKGGSFDFSS 600 HSSGAKRAGE RRRSKTEKSI SLQVLRQYFA GSLKDAAKSI GVCPTTLKRI CRQHGITRWP 660 SRKIKKVGHS LQKLQLVIDS VHGAEGAIKL SSFYTNFPEL SSPNNPGTSN LSASKDDDHL 720 QQVNTQLDVS PVTTTSKSTS SSGSHNSSSS LLCSTTNVFA TTEEHPARGM LKRAHTETEL 780 HDMGQEETKL LVRSQSQKIQ SNHNSSEPLR PLPNQLLQDS GTFKVKAIFG KEKIRFSLQS 840 HWGFGDIQHE VLRRFNVEDV GKIDLKYLDD DDEWVLLTCD ADLEECIDIH KLSKRRTIKV 900 SLHHTYHHNL GSSFGSSGPA

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MEDGAFTLND MLAKLSDNTT ATDFSFMGEF LSDGFWLEAT DQGSNYFCNQ PALPFTSTSS  60
LPSQPLSFDT NVSIPSTNQV AFQQETEKDK IADNLFVPQM DESSAPTRDN THTSPRPDSS  120
AFQVEGTQMN RRLWIGPNTL TNPNPTLSVK TRLVQAIEYL KNSTRDKDVL IQIWVPVKRG  180
GKHVLVTNNQ PYFINPNSQS LLEYRYVSQN YQFAAEKDSK ELVGLPGRVF LKKLPEWTPD  240
VRFFKREEYP RVNYAHQHNV RGSIAVPVFE SGSGTCLGVV EIVTTIQKTH YHPELEDVCK  300
ALEAVNLRSS GISSNPAKVK DCNESYLAAL AEIQYILTCV CDTHKLPLAQ TWAPCIQQGK  360
GGCLQSDEHF ASCVSTVDSA CYVRDPQVVP FHFACSEYHL LKGEGVAGGA FNTNQPCFAT  420
DITAFSKAEY PLSHHARMFG LCSAVAIRLR SIYTGSADFV LEFFLPLDCK NTEDQKQMLS  480
SLSSVIQQSC RSLRVVTDQE LQEEKVSLSV GGSHEEEARK PVSPSYRDQD SSSWLSEMMD  540
AQRKGKGAAV SENHRDKQEE NFKVTATPWD YTQKEPIHAS TFSEPNQSFV AKGGSFDFSS  600
HSSGAKRAGE RRRSKTEKSI SLQVLRQYFA GSLKDAAKSI GVCPTTLKRI CRQHGITRWP  660
SRKIKKVGHS LQKLQLVIDS VHGAEGAIKL SSFYTNFPEL SSPNNPGTSN LSASKDDDHL  720
QQVNTQLDVS PVTTTSKSTS SSGSHNSSSS LLCSTTNVFA TTEEHPARGM LKRAHTETEL  780
HDMGQEETKL LVRSQSQKIQ SNHNSSEPLR PLPNQLLQDS GTFKVKAIFG KEKIRFSLQS  840
HWGFGDIQHE VLRRFNVEDV GKIDLKYLDD DDEWVLLTCD ADLEECIDIH KLSKRRTIKV  900
SLHHTYHHNL GSSFGSSGPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein