PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10661.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 452aa    MW: 50299.6 Da    PI: 7.043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.81.3e-08281326554
         AP2   5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 
                 G+r+ k + r+ + I d    + ++k+++lg+f t eeA +a+   + ++e
  PHU10661.1 281 GIRRQK-NERYGVVITD----KiRNKQIWLGTFNTVEEASQAYFYKKFEFE 326
                 899777.8******999....4445******************98888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MMKHVNDLQR VNADIQGYPV MVYGQLEAFF ESQELHEIVG GMGEASSESS YLVPFTIPDD  60
PPYSFPTWVS KARPTNVKLA GARGEGLPSN KDASPRLMTS SGKSMVSWKT VMAHEPNEGL  120
DLIRNSKLPD PIVEMLDSVG MSFETVNMVI YRLIGKANDQ IQQPESPSEQ CLSVGNNQTL  180
DTASVSRINS HGTCHDPNTG LAVTDIPNYE VPEHPSLSGK EQEFSKVTLS LMANVQGTES  240
SNKCNTTSSF LPTDKKSLLG IRRQKNGRYG DVITNKGSLL GIRRQKNERY GVVITDKIRN  300
KQIWLGTFNT VEEASQAYFY KKFEFEKLSQ QGNKENKPKE NLDQIQQPEF PTMQCLSMAI  360
DPTLDTTSVT RINLHETTHF LEVHKNSMSG KENESSKETP CLMASVHGTE SSVECNASTN  420
CSPKGKKSLI RVRRQKNERY GTVIRDNGSI YT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-09ERF family protein