PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10616.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 443aa MW: 49716.7 Da PI: 6.7439

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	3e-09	248	295	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHU10616.1 248 SHSLAERVRREKISERMRFLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 295 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MNIALPEMLH NITSNGGNGS SELSVLDRQR ARMKWQQEQV HQQEMSYFSG QNDQLMNCFH 60 QSSEGQQFHG LINVNDQSLN ELVTRAIKPD PCLENNWRDF GTTGANGFGY VPIRVGHGGM 120 SHPAEMNYAI SRTTSCPPTM ADNAVSAVKP KETILSSNRG RESFKKRKAD KNHLKEVAEE 180 ETKDKKLKEC IEEGDSKVTT EKHSNKRSTN NSNSKENSDT SKEKSKITED KKPDYIHVRA 240 RRGQATDSHS LAERVRREKI SERMRFLQDL VPGCNKITGK AGMLDEIINY VQSLQRQVEF 300 LSMKLAAVNP RLDIDVDNFF NKDIFATSTS NFPTVGAGTS SEMLSMAQRQ FNSLQQIVSS 360 SGLEMGVLNL SEMALRRTAS TPVSMPEIFL DSSSINQVQS FPTWDTDLEN MYAMELQQGR 420 SVQFLPHPST GFVEAGNDLK MEM

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MNIALPEMLH NITSNGGNGS SELSVLDRQR ARMKWQQEQV HQQEMSYFSG QNDQLMNCFH  60
QSSEGQQFHG LINVNDQSLN ELVTRAIKPD PCLENNWRDF GTTGANGFGY VPIRVGHGGM  120
SHPAEMNYAI SRTTSCPPTM ADNAVSAVKP KETILSSNRG RESFKKRKAD KNHLKEVAEE  180
ETKDKKLKEC IEEGDSKVTT EKHSNKRSTN NSNSKENSDT SKEKSKITED KKPDYIHVRA  240
RRGQATDSHS LAERVRREKI SERMRFLQDL VPGCNKITGK AGMLDEIINY VQSLQRQVEF  300
LSMKLAAVNP RLDIDVDNFF NKDIFATSTS NFPTVGAGTS SEMLSMAQRQ FNSLQQIVSS  360
SGLEMGVLNL SEMALRRTAS TPVSMPEIFL DSSSINQVQS FPTWDTDLEN MYAMELQQGR  420
SVQFLPHPST GFVEAGNDLK MEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-57	bHLH family protein