PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10440.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GRF

Protein Properties

Length: 365aa MW: 41553.5 Da PI: 8.641

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.8	5.1e-25	78	121	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e PHU10440.1 78 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 121 79***************************************986 PP
2	QLQ	52.6	1.4e-18	11	45	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l+yK +++++P+P++Ll i+ PHU10440.1 11 PFTATQWQELEHQALIYKFMVSGMPIPADLLYTIR 45 8*****************************97775 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MMSTTARSRF PFTATQWQEL EHQALIYKFM VSGMPIPADL LYTIRRSLDS SLSSKLILHQ 60 PHHIGWNCFP MGFGKKIDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGRNRSRKPV 120 EIMTSNTSTT TRTTPPTAIP ISSITKSTNN PSTCSPTSFS YLTSSSSAHE PHHHPFLYPH 180 SSSSRPPPIT QDHTPKFLLE STAYSRNGYG DGMKEEVDEH IFFSEASGTM RSTCGSNSVD 240 DTWQLSALTM SSSPMCHLKQ RTYSPSQSTT GHSAASYLQL QSFNNDSSIL QQQQRQYYHD 300 LPMKIETEDH QPKKVMHHFF DEWPPKDNKD SWLDSDDKFL GLSKTQLSIS IPNPSQDFFI 360 TTNGK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MMSTTARSRF PFTATQWQEL EHQALIYKFM VSGMPIPADL LYTIRRSLDS SLSSKLILHQ  60
PHHIGWNCFP MGFGKKIDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGRNRSRKPV  120
EIMTSNTSTT TRTTPPTAIP ISSITKSTNN PSTCSPTSFS YLTSSSSAHE PHHHPFLYPH  180
SSSSRPPPIT QDHTPKFLLE STAYSRNGYG DGMKEEVDEH IFFSEASGTM RSTCGSNSVD  240
DTWQLSALTM SSSPMCHLKQ RTYSPSQSTT GHSAASYLQL QSFNNDSSIL QQQQRQYYHD  300
LPMKIETEDH QPKKVMHHFF DEWPPKDNKD SWLDSDDKFL GLSKTQLSIS IPNPSQDFFI  360
TTNGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-52	GRF family protein