PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10430.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 322aa    MW: 35684.2 Da    PI: 6.6004
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-14100146555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h   Er RR+r+++ feeL++llP++    ++K +K++i+ ++v+YIk+L+
  PHU10430.1 100 HIRTERERRKRMRNMFEELQTLLPHL----QPKADKSSIVDETVRYIKMLE 146
                 7889*********************9....79****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNEGGENDCL IWENDEVWSF LNSDNGQLVG SGVEFVGDKL PDPNRSNTCQ APTAVKEVGK  60
ASLGGKKRCR SNEKKATNES GEPKSGANGD GGRESGHELH IRTERERRKR MRNMFEELQT  120
LLPHLQPKAD KSSIVDETVR YIKMLENTVD NLKEQKLERI QLGIARLSTM NNPIMTPQKL  180
RVGTSWEQFL ANKGSASNSA AITPKNNNNM TGIPLLNTNV PTDFETWSSD NIVLNVCGEE  240
AHISVCCPKK PGLFTFICHV LEENKIDIVH AHVSSDQFRN LFMIQTHARG ASGLEQLISG  300
ALSVEDMYKQ AAHEIMSGIN PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.16e-35bHLH family protein