PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU10367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 210aa MW: 23170.6 Da PI: 9.1838 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 66.2 | 3.3e-21 | 17 | 63 | 4 | 48 |
-SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T..TSEEEE CS SRF-TF 4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifss..tgklye 48 +n+sn qvtfskRr+ ++KKA+EL++LC+ae+a+++fs+ +k+y PHU10367.1 17 KNESNMQVTFSKRRASLFKKASELCTLCGAEIAIVVFSPgkANKVYS 63 89***********************************9722456665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MPRMSKGRKK VEIVEMKNES NMQVTFSKRR ASLFKKASEL CTLCGAEIAI VVFSPGKANK 60 VYSFGHPSVE LLVDMFLGRD LPPPNDDDRH NHLIRAHQNT DQRRLNKEVM DMQESLQKEK 120 AVGKSLLVSG RGAYDRVCEY PIIEGLSLSQ LEQLKEALEA QKRKVEFEAK LQQMGSAPLP 180 FLTFGSALSP SGGDGASSSH GPNVGAPFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 4e-42 | M-type_MADS family protein |