PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10315.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 351aa    MW: 39723.8 Da    PI: 6.5732
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.1e-13171218355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  PHU10315.1 171 QDHIIAERKRREKLSQRFIALSALIPGL-----KKMDKASVLGDAIKYLKQLQ 218
                 6799************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEYYGFNQQW PISSFDELSA ISIAASFGEN TLHDSFMYHD QPILGHKRPI ELSQTVEERP  60
LKNPKTSHSW NNNNSYHEND QMLSSQSVAS PNYSHLINSN NLSNQQDVTM KPKEETTLSS  120
SSITFAADHH NNMVCHQDSF ANQNYMFKAN NSCQGANKSV STNNGKLTQA QDHIIAERKR  180
REKLSQRFIA LSALIPGLKK MDKASVLGDA IKYLKQLQER VKTLEEQTKK KSVESVVFMK  240
KYELYGDGEN SSSDENNSIG TQQMDEALPE IEARICEKDV LIRIHCEKRK GIVEKTVTEI  300
EKLHLSIINT CALTFGTCAL DITIIAQMDE EFAMTVKDLV KNLHTALKMV I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177182ERKRRE
2178183RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-61bHLH family protein