PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C3H
Protein Properties Length: 319aa    MW: 34319.6 Da    PI: 6.5132
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.17.2e-09152177227
                 -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                 k e Cr +  +GtC++G++C+F Hg+
  PHU10150.1 152 KSETCRWWEDFGTCRFGSKCRFVHGK 177
                 6789********************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEFFYGSSND SFDGDVSPII GRSRFYHGSK SQILDPYASS DSTGSNIVSP LARYLCPTSP  60
VPFTSDSPKR RSLNSGSRSG SGGGIVSRSP LASIENIEIP PVFRNPVKVE EDVVVMDGIL  120
VEPKHGVRGK SSPSTSDSGG RLTSGSENSF HKSETCRWWE DFGTCRFGSK CRFVHGKEDL  180
RPTAFANRNQ SEALYSRSYS SGSSSYGPRG RSVHHQVHSA APTPTEAAAA AMTTPTTTSN  240
VKKGDKEPSS SESSTTSIST IAISGTDWSP LDDNIEVTLP SSGEKCVSRD DVDAHIRTVL  300
YGPSGRKRLP VFADFDEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.13e-06C3H family protein