PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU09672.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 414aa MW: 45715.7 Da PI: 7.2106

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU09672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.3	4.8e-31	230	288	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp+++++tY+ eHnh+ PHU09672.1 230 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPNMFIVTYTAEHNHP 288 79**********************9988**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MLLLRSLSIS LPPKKSAPCF VLFFSLSLSA LPLSLSPKKV NMEEDWDLHA VVRGCTASST 60 TTTTSTTTTA TSCCSFQPRQ DGNFFSFQDP FVPRFDNPTS DFEELHNLYK PFFPKSQVQP 120 QQQVPRSPQN NIIPISPLSV LGGLQDLSAP QPTLKQQQQQ QQQQQQHIHQ FFNSTRLTQP 180 KQSLSVNGST NSTITASSSL GVSHTQSPRP KRRKNQLKKV CQVPAEGLSS DMWSWRKYGQ 240 KPIKGSPYPR GYYRCSTSKG CLARKQVERN RSDPNMFIVT YTAEHNHPMP THRNSLAGST 300 RQKPANSEAG TTASDSNKPT SSSPVSSPAC HSTATEKQES SREEKEDIFE DEDEEFGSSN 360 MGLDNMEPAD DDFFEGLDEL AAQATGDCFS DNFQGSMQLP WLSNNATTTA AGGV

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MLLLRSLSIS LPPKKSAPCF VLFFSLSLSA LPLSLSPKKV NMEEDWDLHA VVRGCTASST  60
TTTTSTTTTA TSCCSFQPRQ DGNFFSFQDP FVPRFDNPTS DFEELHNLYK PFFPKSQVQP  120
QQQVPRSPQN NIIPISPLSV LGGLQDLSAP QPTLKQQQQQ QQQQQQHIHQ FFNSTRLTQP  180
KQSLSVNGST NSTITASSSL GVSHTQSPRP KRRKNQLKKV CQVPAEGLSS DMWSWRKYGQ  240
KPIKGSPYPR GYYRCSTSKG CLARKQVERN RSDPNMFIVT YTAEHNHPMP THRNSLAGST  300
RQKPANSEAG TTASDSNKPT SSSPVSSPAC HSTATEKQES SREEKEDIFE DEDEEFGSSN  360
MGLDNMEPAD DDFFEGLDEL AAQATGDCFS DNFQGSMQLP WLSNNATTTA AGGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01250.1	2e-65	WRKY family protein