PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU09664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 319aa MW: 35855 Da PI: 9.6805 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.5 | 1.5e-13 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky PHU09664.1 56 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 100 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MVSVYPTLPG QDFQYMGDPM KTGLRGLHPV QSGTGLVMPD DPNKKTRKPY TITKSRESWT 60 EQEHDKFLEA LQLFDRDWKK IEAFVGSKTV IQIRSHAQKY FLKVQKSGTS EHLPPPRPKR 120 KAAHPYPQKA PKKVMSQVGS IQFQPPGALP EPGFGIGPDP LSVPGNAINF SPWTYDNVPA 180 ISTTQMRKDD AQLTSGGVMQ NCSSSSNESM PRNRKTLEAN DQKESQKQMK VMPDFAEVYS 240 FIGSVFDPST RDHLERLKKM DPIDIQTALM LMKNLSFNLS SPECEDHRRL LSSYGLGIEK 300 DKMDLPIKTD FRGNAIQAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 5e-86 | MYB_related family protein |