PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU09433.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24624.1 Da PI: 8.6889 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95 | 3.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngilKKA+E+SvLCda+v+viif+++gk++e+ss PHU09433.1 9 KRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFATSGKMHEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 90 | 4.4e-30 | 69 | 164 | 1 | 96 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 y+k +g++l++ak+e+l++e++++kk ++n+q e+Rhl+Ged++sL+++eL+ Le+ Le++l++iR+k+ne+++++ +++q +e+e+++ n +Lr+ PHU09433.1 69 YHKLTGRRLWDAKHENLDNEINRVKKDNDNMQIELRHLKGEDISSLNYRELMILEDGLENGLTSIRDKQNEFMRMMRKKTQGMEEEQEQLNCQLRQ 164 78999999**************************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGILK KAKEISVLCD ARVSVIIFAT SGKMHEFSST 60 SLVDILDQYH KLTGRRLWDA KHENLDNEIN RVKKDNDNMQ IELRHLKGED ISSLNYRELM 120 ILEDGLENGL TSIRDKQNEF MRMMRKKTQG MEEEQEQLNC QLRQLEIASM NRNMGEIGEV 180 FEQTRGNHEY QMPFAFRVQP MQPNLQERF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 3e-78 | MIKC_MADS family protein |