PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU09209.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 333aa    MW: 37885.7 Da    PI: 4.999
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU09209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.64.2e-08270316753
                 --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                 ++k  le+Le+++++++ p+ +++  + + ++L+ ++V  WF  +R 
  PHU09209.1 270 LKKVHLETLEQVYRRSKRPTNAMISSIVHVTNLPRNRVLKWFEDKRS 316
                 667789**************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MASASTTRAI SISVGCYSNE HLLLGQSRSR SNIALQLHLR PSSSLLTFSR RRSNSAITST  60
KKKKKSSPRK DTEEVDEIHK DAFEALFQLL EEDLKTDDRS VNDDDDITEE DLEKLERELE  120
EALEDDEQLG VIDSIADEKI ESKTEDEESV AENNNEDNEG EEMLVNLKNW QLKKLACALR  180
KGRRKLNIKN LVADLCLDRA VVLEILSNPP PSLVLLSAAL PDELVPRMIE PENKLQEPVP  240
TEMSDAAKPE AKEEAPVHVM QSSWYAQKRL KKVHLETLEQ VYRRSKRPTN AMISSIVHVT  300
NLPRNRVLKW FEDKRSEEGV PDHRLPYQPS SKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15065RRRSNSAITSTKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.18e-55HB-other family protein