PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU09179.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 416aa MW: 46266.6 Da PI: 6.5162

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU09179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.9	7.3e-38	59	209	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesssssas 83 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG ++sk +eWLl++a p+i el+ + ++++ +++++++++ PHU09179.1 59 SGGKDRHSKVLTSKGLRDRRVRLSVNTAIQFYDLQDRLGCEQPSKVVEWLLKEAAPSISELPPLeafpdtlqlrdekrssvGTEPG---FDSAQVEMDD 154 689***********************************************************7777777665544333322222...2233333344 PP TCP 84 nsssg.kaaksaakskksqksaasalnlak.esrakarararertrekmriknkl 136 ++ + ++++++++ ++s++s+ s l l++ +sr kar+rarer +ek + k+++ PHU09179.1 155 DPNYNqQQQQEKPCCSNSETSKGSRLILSRsNSRLKARERARERATEKEKEKENK 209 4444435555555999999999999999999**********999999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MEEIQTEECK FPRISNKEDK QYQYDVDDAG EVNKCTDLGG IGKLYGWPSS RIVRESRASG 60 GKDRHSKVLT SKGLRDRRVR LSVNTAIQFY DLQDRLGCEQ PSKVVEWLLK EAAPSISELP 120 PLEAFPDTLQ LRDEKRSSVG TEPGFDSAQV EMDDDPNYNQ QQQQEKPCCS NSETSKGSRL 180 ILSRSNSRLK ARERARERAT EKEKEKENKS SVVAHHQNMH PISSFTELLT GGMNDNNSDN 240 KSNTSPNGSI HQNTPRQWCT NPLEQFTSGL LGSSTTRGID NSTGFSGQIY FENPQQPLLA 300 VSSSMFSISR DHQPELQHFP FGSDNLVPAV TSSQSNTSNE YNLNFSLSSS ASGFNRGTLQ 360 SNSSSSPSTL PHFQRLSPTD GSQSLFHGTT TEYDARLQLF YGNGYGHSDQ KGKGKN

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MEEIQTEECK FPRISNKEDK QYQYDVDDAG EVNKCTDLGG IGKLYGWPSS RIVRESRASG  60
GKDRHSKVLT SKGLRDRRVR LSVNTAIQFY DLQDRLGCEQ PSKVVEWLLK EAAPSISELP  120
PLEAFPDTLQ LRDEKRSSVG TEPGFDSAQV EMDDDPNYNQ QQQQEKPCCS NSETSKGSRL  180
ILSRSNSRLK ARERARERAT EKEKEKENKS SVVAHHQNMH PISSFTELLT GGMNDNNSDN  240
KSNTSPNGSI HQNTPRQWCT NPLEQFTSGL LGSSTTRGID NSTGFSGQIY FENPQQPLLA  300
VSSSMFSISR DHQPELQHFP FGSDNLVPAV TSSQSNTSNE YNLNFSLSSS ASGFNRGTLQ  360
SNSSSSPSTL PHFQRLSPTD GSQSLFHGTT TEYDARLQLF YGNGYGHSDQ KGKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	2e-42	TCP family protein