PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU09178.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 430aa    MW: 47870.4 Da    PI: 6.9559
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU09178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP125.55.8e-39602162136
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................ssssasec...eae 76 
                  g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG d++sk++eWLl++a p+i el+ +                     +++    +   e +
  PHU09178.1  60 SGGKDRHSKVLTSKGLRDRRVRLSVNTAIQFYDLQDRLGCDQPSKAVEWLLKAAAPSIAELPPLeafpdtlqlsdekrssvgtepDFD----SadvEMD 154
                 689*************************************************************999999999988888885544333....2223222 PP

         TCP  77 sssssas.nsssgkaaksaakskksqksaasalnlak.esrakarararertrekmriknkl 136
                 +  + ++ +++++++ +++++ ++s++s+   l++++ +sr kar+ra+er +ek + k+++
  PHU09178.1 155 DYPNYKQqQQQQQQQGQQKPCCSNSETSKGPGLSFSRsDSRLKARERAKERATEKEKEKENK 216
                 22222221222335555666888888888889****99************999999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MEMEEIRTEE CKFPRIRNKE DEQYQYEVDD AGEDKKRGLG AIAKFYGRPS SRIVRVSRAS  60
GGKDRHSKVL TSKGLRDRRV RLSVNTAIQF YDLQDRLGCD QPSKAVEWLL KAAAPSIAEL  120
PPLEAFPDTL QLSDEKRSSV GTEPDFDSAD VEMDDYPNYK QQQQQQQQQG QQKPCCSNSE  180
TSKGPGLSFS RSDSRLKARE RAKERATEKE KEKENKSSVV AHHQNMHPSS SFTELLTGGM  240
SDNNNNNSNT SPNASIHQNM PRQWSTNPLE YFTSGLLGPS STRGIDNTSG FSDQIYIGNP  300
LQSLRVVPSP MFSITGDHRP ELQHFPFGGD NLVPSVTTSG GSNCNGHRSN TSNEYNLNFS  360
ISSSASGFNR GTLQSNSSSS QSTMPHFQRF SPINGSQNLF HGTTTEYDAG LHLFYGNGYG  420
HSDQKEKEKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.11e-42TCP family protein