PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08823.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 524aa    MW: 61123.1 Da    PI: 9.3838
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.62.1e-131992771099
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +k+g l +p  f++  +g   ++++  +  + +++W vk+  +       l++GWk+F+k+++L+ gD +vF+++g++ef  +v++f++
  PHU08823.1 199 GFKRG-LKIPIGFLRYLKGL--KHIEHAILRRASKKWLVKV--NCW----RLEDGWKKFAKEHDLQLGDLLVFRHEGHMEF--KVSIFDS 277
                 55665.9*******555555..3567888899*********..333....399**********************999999..9999987 PP
2B351.12.5e-16389468587
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +++++++++++l+lpk f++++g++   + +++l de+ rsW+v l  +  + ++ ++ GW +F kang+++gD+ +F+l+++
  PHU08823.1 389 TIKHYTFTKAILYLPKGFTKSNGMID--KHEMILVDEKQRSWTVWL-GKMDPHHFGIKCGWPQFRKANGVQVGDTYMFELTDN 468
                 568999****************8884..448***************.466666699***********************9874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MEASIDRIRS KWRCLGFNRA RNDLSHNLRT NDPKWGRLKC LRLWAFANFL SLRLFALLMV  60
WLQVRVHSYV VQCPNHWRSV LVTTRPYESY GLVMSGTRKS ALKSTSLLEI PDLIIGFVVN  120
HEIILKVDFY EMSADNLKGV VFSTEQVQVL SLSRVYDFPS TSSYIPAVDI ALFNREGILL  180
IAMKIAPKKP YFFKPIMPGF KRGLKIPIGF LRYLKGLKHI EHAILRRASK KWLVKVNCWR  240
LEDGWKKFAK EHDLQLGDLL VFRHEGHMEF KVSIFDSSHC DREYAEYLRE EEESNTIEET  300
SKKVKFKEAA IHNPCGQYRF ECIVRPYCVS NGYLEGDYMT FEVVANGEKP KWKFRFIKDL  360
RHKALDMTTP ISQIPASTSA NADPHFISTI KHYTFTKAIL YLPKGFTKSN GMIDKHEMIL  420
VDEKQRSWTV WLGKMDPHHF GIKCGWPQFR KANGVQVGDT YMFELTDNGT IPIMHVHYVS  480
MMSEGTPNNE RFLVIEAWKH SDFLCTFVFW PMRIGHMTFE LDCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.15e-22B3 family protein