PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08654.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GRF

Protein Properties

Length: 333aa MW: 37032.9 Da PI: 8.8617

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77	1.9e-24	71	115	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ PHU08654.1 71 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVES 115 79****************************************986 PP
2	QLQ	65.6	1.2e-22	10	45	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa Q+q+L++Q+++yKyL+a++PvPp+L+++i++ PHU08654.1 10 PFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRR 45 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGYDYGFRPP FTAVQWQELE HQAMIYKYLV AGLPVPPDLV VPIRRSFDAI SARFFNHPSL 60 GYCSYYGKKF DPEPGRCRRT DGKKWRCSKD AHPDSKYCER HMHRGRNRSR KPVESQTTSQ 120 SLSTSISHIT TGSSNRSGSF QSNSSGSFQN MQLYSVANSD GMSYGSTTTK LQMEPVSYGV 180 NNKDYRYLHG MAPDADDESF SSEASASVRG LGGTGSNTDN MWRLLPSQVP SKPNPKNDSQ 240 LLGSSPNPFE PVIESKQQPQ HCFFSSDIGS PGTLKQEPQH PMRSFFDEWP TSKESWSNLD 300 EGSSKNNFST TQLSISIPNA PSGFSSRSAP SPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-49	GRF family protein