PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25866.8 Da PI: 5.0312 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9.5e-19 | 47 | 97 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +++Wv+eIr+pse +kr++lg++ t+e+Aa+a++ +++l+g+ PHU08541.1 47 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 97 69****887.8*********976...5*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MENLERDHSQ ETSSSSSEKS GGGLLLAANQ PKKRAGRKKF KETRHPIYRG VRRRNNNKWV 60 CEIREPSEQK RIWLGTYPTP EMAARAHDVV ALALRGNLAI LNFEDSSWRL PVPVSKDPKE 120 LRQAAMIAAN AFHQDSDESV GVDYMNQEIN SNDVVGGGAS GSDNNIQNMD ILCCNNWGEN 180 NEMLEIEGLS WQEKMSEELL FSPTPRFGSC YSWDDVKSDV EVSLWSYNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 2e-51 | ERF family protein |