PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08491.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 281aa    MW: 32009.6 Da    PI: 8.6186
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.98.5e-28133193259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+r ++d +v eitY+g+Hn++
  PHU08491.1 133 DDGYSWRKYGQKHILGAKYPRSYYRCTYRhmqNCWATKQVQRLDDDATVYEITYRGSHNCR 193
                 8**************************99899***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDCSFNWQYK TLINELTRGI EHAKQLKAYL SSVASTSENQ ELLLQKILSS YEQSLVILKR  60
TGSTVHSSKP LPPMCGAIES SVSVDGSPKS DDKKRCFKEH QELIDISKKR KSQLTRTEQV  120
KVSAESGFEG PTDDGYSWRK YGQKHILGAK YPRSYYRCTY RHMQNCWATK QVQRLDDDAT  180
VYEITYRGSH NCRQATNRAS LEKQELKKQA VYQTGQQYSN QALMNSRANL KVDTDDLEKN  240
ETACPFSFPP TFSGSTDENQ HFQISDVDDN RTTSQSQAAA R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193111KKRCFKEHQELIDISKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-58WRKY family protein