PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08489.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 307aa MW: 34558.2 Da PI: 7.917 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79.2 | 4.4e-25 | 135 | 196 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGq ++ g+ +prsYYrC + gC ++k+v+rs++d +++eitY+++H+++ PHU08489.1 135 LDDGYSWRKYGQTKILGAYYPRSYYRCRYWllkGCAATKHVQRSNDDITIFEITYKNSHTCR 196 59**************************97788***************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MDCVFTWDYN SLINELTQGM EHTKQLKTYL SSVPSTSEST SNSLLQKILS SYEKSLLILK 60 WTGSTVQSLQ PLPPTGGAIE PPPAASDDRS HNCDDKKRSF KDHTELIDSS NKRKSQPRWT 120 IQFNVRTGSG FEGALDDGYS WRKYGQTKIL GAYYPRSYYR CRYWLLKGCA ATKHVQRSND 180 DITIFEITYK NSHTCREVTN SALQQKSPEK QANHQTPTVD GYSLSFVSPT ATESNYVSVS 240 GSQMNSFGRV HNSNHSESYL SDIGIIQNLY HSDSDRTYTL SANTSTTSSS IEGMDVQWAE 300 FRQVKVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 2e-34 | WRKY family protein |