PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08180.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 321aa MW: 36505.7 Da PI: 8.9517

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41	3.5e-13	152	197	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N+ f+ Lr+llP +K +Ka++L +++YI+ L PHU08180.1 152 HHMISERRRREKLNENFQHLRSLLPLG-----TKKDKASVLASTTDYISCL 197 68899******************97.....7*************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MNNLFPNDFS NQTPPPPPPT TTTTRKAIIL PIDQNLHSSS SSSSEYSPLY LNEIQKLTQF 60 PKIEGEDDAL RQAYLAVLSS SSSPSPSLSR GQTTDKLTRM SSAFTKFRPD NYVSTSCKHH 120 NNNILKRYMT FFNNLYMINR QEGVRATTTQ VHHMISERRR REKLNENFQH LRSLLPLGTK 180 KDKASVLAST TDYISCLKDQ VKELCKRNEI LEAQLLNKKE AFQFQQNESG KVAVYITNVE 240 ERIVDLQVIA RGKCSIVDLV ICLMKFLKMV NFVNLVAIDA NTTLVQSCPV AVITLRLTIQ 300 GDEWEESTFI EATKRVVEYT T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	162	ERRRRE
2	158	163	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	8e-40	bHLH family protein