PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU08143.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 26223.1 Da PI: 9.3493 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.6 | 2.9e-13 | 126 | 170 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky PHU08143.1 126 PWTEDEHRKFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 170 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRKCSHCGY IGHNSRTCST LKCAISGSNF IGGLKLFGVQ LDTANSSSSS SSSSSFSSHN 60 LTKSFSLDCL SLTNSHIGHS HLSSSLSPSP SINESCEKST TSINNNGYLS DGIGVGCVGE 120 RKKGAPWTED EHRKFLIGLE KLGKGDWRGI SRNFVTTRTP TQVASHAQKY FLRQSSINKK 180 KRRSSLFDMA RINNKFEDCQ ENSHWIYGSQ NSHHNEVPNN KSISSNGNID LELSLSNNIV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 179 | 183 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 2e-54 | MYB_related family protein |