PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08100.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CPP

Protein Properties

Length: 625aa MW: 67514.7 Da PI: 7.7444

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45	2.1e-14	155	194	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C++C+N+ e+ PHU08100.1 155 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCNNCHNNVEN 194 89************************.******9875 PP
2	TCR	50.8	3.3e-16	239	278	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PHU08100.1 239 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 278 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MEKSEGGDFP TKKVESEVVN SAVTTAATAG VDFPAKKLAR QLDFTVFSQS PAAAVTSVTE 60 QNQPVVMTSG AQVVPVKLTP VTRPQLQLQP QQQPQQSQTQ PQQQQQQHVL LMPMKGTAAA 120 APPTTHPSIR PPKPDSPRAR SRQSTSEVKD GTPKKQKQCN CKHSRCLKLY CECFASGIYC 180 DGCNCNNCHN NVENEPARRE AVEATLERNP HAFRPKIASS PHGARDNKEE TGDGLVLAKH 240 NKGCHCKKSG CLKKYCECFQ ANILCSENCK CMDCKNFEGS EERQALFHGD HANNMAYLQQ 300 AANAAITGAI GSSGYGSPPV TKKRKAQELF FGSTLKDPVH RHGQLQQGNH IKSSALPSLS 360 SIPGPCVSNA ATVGPSKFTY RSLLADLIQP QDLKELCSVL VVYSGEAAKM LADEKDASQK 420 QAEGQTEASL ASSTQERDMH DCCSSGDQGE KIGMEESSLD GADVSKRRPM SPGTLALMCD 480 ESDAMFAAAV SSPNDLATLS SNTSSQLPHG QGMTETYGEQ ERIVLTKFRD CLNRLITLGE 540 IKETKCSSMV RGTDSVDQQG MTGNVFTTAE TRNQHDSFNN GVSRSSLPQS RTTTQMFSAV 600 VTTANNTALS KVHRPDENGD VKPKV

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MEKSEGGDFP TKKVESEVVN SAVTTAATAG VDFPAKKLAR QLDFTVFSQS PAAAVTSVTE  60
QNQPVVMTSG AQVVPVKLTP VTRPQLQLQP QQQPQQSQTQ PQQQQQQHVL LMPMKGTAAA  120
APPTTHPSIR PPKPDSPRAR SRQSTSEVKD GTPKKQKQCN CKHSRCLKLY CECFASGIYC  180
DGCNCNNCHN NVENEPARRE AVEATLERNP HAFRPKIASS PHGARDNKEE TGDGLVLAKH  240
NKGCHCKKSG CLKKYCECFQ ANILCSENCK CMDCKNFEGS EERQALFHGD HANNMAYLQQ  300
AANAAITGAI GSSGYGSPPV TKKRKAQELF FGSTLKDPVH RHGQLQQGNH IKSSALPSLS  360
SIPGPCVSNA ATVGPSKFTY RSLLADLIQP QDLKELCSVL VVYSGEAAKM LADEKDASQK  420
QAEGQTEASL ASSTQERDMH DCCSSGDQGE KIGMEESSLD GADVSKRRPM SPGTLALMCD  480
ESDAMFAAAV SSPNDLATLS SNTSSQLPHG QGMTETYGEQ ERIVLTKFRD CLNRLITLGE  540
IKETKCSSMV RGTDSVDQQG MTGNVFTTAE TRNQHDSFNN GVSRSSLPQS RTTTQMFSAV  600
VTTANNTALS KVHRPDENGD VKPKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	0.0	CPP family protein