PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07954.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 440aa MW: 48760 Da PI: 7.3603

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.5e-32	235	290	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PHU07954.1 235 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 290 68****************************************************97 PP
2	Myb_DNA-binding	40.5	6.5e-13	237	288	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ PHU07954.1 237 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 288 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNMTSSNSEL SLECKPHQSY SMLLKSFGEK IDQTQNLEEF LARLEEERVK IDAFKRELPL 60 CMQLLTNAME ASRQQLQSHR ENNHIGHRPI LEEFIPLKNN NNASVELGAE KIVANNTSTI 120 VDNKANWMTS AQLWSPPSDH QETKQIQTSN NTSNKENDHH IGFSISPKLA LDNNSSCPSP 180 TTLALASSNK QNESTIVEDH NKNLEGVNIQ QDSQSIGGGT NSTSTSTQQQ QPHRKARRCW 240 SPDLHRRFVN ALQMLGGSQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA 300 TTAPPHLVVL GGIWVPPEYA AAAATHGGAP PAATFYGPHS TSHAPSPHYI AAPQAVTQEF 360 YSTPQPLQSL HHLQHHQQMY HHGSHMYKPP SKSHSHSSPE SDARGTGQHG DRSSESIEDG 420 KSESCSSENG GERKVVVHKF

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNMTSSNSEL SLECKPHQSY SMLLKSFGEK IDQTQNLEEF LARLEEERVK IDAFKRELPL  60
CMQLLTNAME ASRQQLQSHR ENNHIGHRPI LEEFIPLKNN NNASVELGAE KIVANNTSTI  120
VDNKANWMTS AQLWSPPSDH QETKQIQTSN NTSNKENDHH IGFSISPKLA LDNNSSCPSP  180
TTLALASSNK QNESTIVEDH NKNLEGVNIQ QDSQSIGGGT NSTSTSTQQQ QPHRKARRCW  240
SPDLHRRFVN ALQMLGGSQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA  300
TTAPPHLVVL GGIWVPPEYA AAAATHGGAP PAATFYGPHS TSHAPSPHYI AAPQAVTQEF  360
YSTPQPLQSL HHLQHHQQMY HHGSHMYKPP SKSHSHSSPE SDARGTGQHG DRSSESIEDG  420
KSESCSSENG GERKVVVHKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-82	G2-like family protein