PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07766.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HD-ZIP
Protein Properties Length: 777aa    MW: 85912.6 Da    PI: 5.4239
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2082138157
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                 r++ +++t++q++eLe++F+ +++p+ ++r+eL++ lgL+  q+k+WFqN+R+++k+
  PHU07766.1  82 RKRYHRHTQHQIQELEAYFKDCPHPDDKQRKELSRVLGLDPLQIKFWFQNKRTQMKN 138
                 789999************************************************995 PP
2START191.63.7e-602945142206
                 HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 la+ a++e+v++a  +ep+W++s      + +n++e+ + f+++ +     +++ea+r++++v+m++ +lve+l++ +  W+  +a    +a+t++v+s
  PHU07766.1 294 LALVAMEEFVQMAHMKEPLWFSSNidngtSLLNEEEYFRFFPRGIGprpigFNTEASRDTAIVIMNPINLVEILMEAN-HWSSLFAnivsRASTIDVLS 391
                 67889*********************99999************999********************************.88888888888********* PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 ++      ga q+++ae+q++sp vp R+ +fvRy++   +g+w+++dvS+d+ +         R++++pSg+li++++ng+skvtwvehv++++ l+h
  PHU07766.1 392 TAvggnynGAMQVIFAEFQVPSPQVPtRECYFVRYCKHRADGTWAVMDVSLDQIRAGA----ALRCRRRPSGCLIQELPNGYSKVTWVEHVEVDDTLVH 486
                 ********************************************************98....5************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +++++lv+sgla+ga++wvatl+rqce+
  PHU07766.1 487 NIYKPLVSSGLAFGAQRWVATLDRQCER 514
                 **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    
MPARNSGPAR MMPSLVGSDG TDTGFPVGQP SNMIDVQVHS LDISNNTSES DVPQDIGTKS  60
GNSGGDADHA EQDEDANNSR KRKRYHRHTQ HQIQELEAYF KDCPHPDDKQ RKELSRVLGL  120
DPLQIKFWFQ NKRTQMKNQH ERHENTHLRA ENEKFKSEVM RYREALGNVS CPNCGVGQPQ  180
RVLINEMSFD ERQLRLENAR LREEIVRITS EAGRYVGRSL FQNTTFQNNH NGYNSPTPAD  240
FGVLPPYSTP QSVVDGGEAF NNNNEVDIVD HQDISIMSSM IAPTEVEKQF IIELALVAME  300
EFVQMAHMKE PLWFSSNIDN GTSLLNEEEY FRFFPRGIGP RPIGFNTEAS RDTAIVIMNP  360
INLVEILMEA NHWSSLFANI VSRASTIDVL STAVGGNYNG AMQVIFAEFQ VPSPQVPTRE  420
CYFVRYCKHR ADGTWAVMDV SLDQIRAGAA LRCRRRPSGC LIQELPNGYS KVTWVEHVEV  480
DDTLVHNIYK PLVSSGLAFG AQRWVATLDR QCERLASALA TYSPTNSVTD MVLSTEESKR  540
SMMKLAERMV NSFGSGVSAS VGNHWTTLAT GSGTDENVRI MTRKSVDDPG RPPGVVLSAA  600
TSFWLPVPPK MVFDYLRDES RRTEWDILSN GGTIQEMAHI ANGRETGNCV SLLKVHGQTE  660
SQSNMLILQE CSTDLTGSFV IYAPIDINSM NVVLNGGDPD FVALLPSGFA ILPDGPPAGN  720
CRGAFNDGSG GSLLTVAFQI LVNSVPTARL SLGSVATVNN LISCTVDRIK GSLFPEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein