PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07484.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 223aa MW: 25336.9 Da PI: 8.8893

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.7	6.9e-27	54	139	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +Y++YA+++GF +r+++ ++s rnge ++r++vC+keg++++++++ + +r+ r gCka++ vkke++gkw+v+kl++eHnH+l PHU07484.1 54 YYSTYATHLGFIMRVDAFRRSMRNGELVWRRLVCNKEGFSKSRQSQ--SGKRKCRAIREGCKAMIIVKKEQSGKWVVAKLVKEHNHPL 139 8***************************************9988..888889999***************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
VNENNKATDD AEMVEESSSG KELTTNGVLE AEGRLNMEPY VGMEFESEEA AKAYYSTYAT 60 HLGFIMRVDA FRRSMRNGEL VWRRLVCNKE GFSKSRQSQS GKRKCRAIRE GCKAMIIVKK 120 EQSGKWVVAK LVKEHNHPLI VKPVNTRKGA ILCQTPDDKD VKIRELTAEL QKERKRSAAL 180 QEQLDMVLID MEDHSEQLSK NISDIVKSVK ELESRKTVFQ NGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	2e-81	FAR1 family protein