PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07406.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 435aa    MW: 46783.6 Da    PI: 6.7234
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP109.45.3e-34301673122
         TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................................ssss 69 
                 g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak++i+el+++                                +   
  PHU07406.1  30 GRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELppwkptigpttnntldqekdlgiqceefvgdnN--- 125
                 89*************************************************************888887766555544444433222222222220... PP

         TCP  70 aseceaesssssasnsssg...............kaaksaakskksqksaasalnlakesrakarara 122
                                   +               +        ++s+++  +++n a +s ++a+a a
  PHU07406.1 126 ------------------DdnvvgpsskramimlR--------NESDTRVLHQNNSASSSGENANASA 167
                 ..................02334332211222221........2222222222222223333333332 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MGTSSRFGSR NSGGGEIVEV QGGHIIRSIG RKDRHSKVCT AKGPRDRRVR LAAHTAIQFY  60
DVQDRLGYDR PSKAVDWLIK KAKASIDELA ELPPWKPTIG PTTNNTLDQE KDLGIQCEEF  120
VGDNNDDNVV GPSSKRAMIM LRNESDTRVL HQNNSASSSG ENANASASAN ASFLLPSLDS  180
DAISDTIKSF FPMGGGSTDG NSSAMQFQTF QEHNLLSRTS SQSQELKLSL QSFQDPILLD  240
FQNLQSQHHN RHTEQAQTQF QASNFFTGST PLIGFGASGW PEHQHLPVEL GRMQRLAAAR  300
AGGNNSTGIA LGGGAVTGAG GYLFNSPPAP PLLQQLSGQN QFLFQRGPLQ SSYSPSIRAW  360
LDPSAIAITT TDSIHHHQYH QAVLPMCSAS VSGIGFASEV SGFSGFDIPA RIQGEIEEHD  420
GGSNKPSSAS SDSRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.11e-74TCP family protein