PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07365.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 573aa    MW: 64307.7 Da    PI: 5.8404
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.41.3e-1272035721373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+a+++++l   + l+a+++  +s +gdp+qRl ay++e+L ar   s++++y++l+++e +    ++ ++++ +++e++P+lkf++++aN
  PHU07365.1 203 LKQLLITCARALAENKLDDFEILVAKVRSFVSVTGDPIQRLGAYIVEGLVARKELSGTTIYRSLRCKEPA---GKDLFSYMYILYEICPYLKFGYMAAN 298
                 689***************************************************9**************9...99999999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI+ea  +eer+HiiDf+i qG+QW+++lqaLa+Rp+g+p +RiTg+++p s+  + + l ++++rL+ + e++++ +ef++ v     +++ ++L+v
  PHU07365.1 299 GAIVEACRNEERIHIIDFQIAQGTQWMTILQALAARPGGAPYVRITGIDDPLSQyaRGDGLAAVAKRLSAISEKFNIAVEFHA-VPVFALEVTRDMLDV 396
                 **************************************************9998999**************************.566677889****** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEalaVn++lqlh+++desv+++++rd++++++ksl Pk+v++veqe+++n+++Fl rf+eal+yy a+f+s++a+lpr+s+eri+vE+++l+r+iv
  PHU07365.1 397 RPGEALAVNFHLQLHHTPDESVDVNNPRDDLIRMIKSLCPKIVTLVEQESNTNTAPFLPRFVEALDYYHAMFESIDATLPRDSKERINVEQHCLARDIV 495
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nvvaceg+er+erhe l+kW++r+++aGF+++pls ++ + +k l+++++ + y + e++g+++lgWk+r+Lvs+SaW
  PHU07365.1 496 NVVACEGKERVERHELLGKWKSRFMMAGFQQYPLSAYVSSVIKDLMKRYS-EHYALVEKDGAMLLGWKERNLVSASAW 572
                 **************************************************.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MDSGDYYGYG VTDRDLSYSS YPTVSSLETR PFGTSKFDSG NSPLANYFES HTFNTVTDYQ  60
EQHSFIENLS GASSSSDSSL DYNQYFHRPS PSEDCLPEGL QVFSSGTSAL HNVDHSRNMK  120
HTHLQLESAL VGPHEDAMKS NPYLGKNRGA QTSSLRSRAW NKEAQVLDRT QQSLVSILNG  180
IQSDTQDKVM EDLILLDVPS SNLKQLLITC ARALAENKLD DFEILVAKVR SFVSVTGDPI  240
QRLGAYIVEG LVARKELSGT TIYRSLRCKE PAGKDLFSYM YILYEICPYL KFGYMAANGA  300
IVEACRNEER IHIIDFQIAQ GTQWMTILQA LAARPGGAPY VRITGIDDPL SQYARGDGLA  360
AVAKRLSAIS EKFNIAVEFH AVPVFALEVT RDMLDVRPGE ALAVNFHLQL HHTPDESVDV  420
NNPRDDLIRM IKSLCPKIVT LVEQESNTNT APFLPRFVEA LDYYHAMFES IDATLPRDSK  480
ERINVEQHCL ARDIVNVVAC EGKERVERHE LLGKWKSRFM MAGFQQYPLS AYVSSVIKDL  540
MKRYSEHYAL VEKDGAMLLG WKERNLVSAS AWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-173GRAS family protein