PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07047.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 293aa    MW: 33118.9 Da    PI: 7.3213
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.3e-092873346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     rWT+eE + + +a +++ ++    W  +a++++ g+t ++++  ++ 
       PHU07047.1 28 RWTPEENKVFEEALALFDKDtpdKWYNVAAMIP-GKTVNDVIKQYRE 73
                     9********************************.********99986 PP
2Myb_DNA-binding46.21.1e-14137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       PHU07047.1 137 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MNSEMGFLSP ATYIKNSSWL FEENKGTRWT PEENKVFEEA LALFDKDTPD KWYNVAAMIP  60
GKTVNDVIKQ YRELVDDISD IEAGLIPVPG YTTSNSFTLE WVNNQDGFHG FKQFYGPSGK  120
RGSSNRSSEH ERKKGVPWTE EEHRQFLLGL KKYGKGDWRN ISRNFVTTRT PTQVASHAQK  180
YFIRQLSGGK DKRRSSIHDI TVVNLTESKS TSPEDHKSAP TPQAQQHSQM NGMVKTLCEY  240
NSPNQESDIT FNSSSGGGLI TMPFRGAPSY ELEHGMHNIA LQGLQFGNYN TMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-111MYB family protein