PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU06886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 214aa MW: 24121 Da PI: 8.2925 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.3 | 5.7e-32 | 51 | 107 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYY+Ct ++C +kk+vers+++p++++itYeg H h PHU06886.1 51 DDGYKWRKYGQKSIKNSPYPRSYYKCTNPRCGAKKQVERSSNEPDTFIITYEGLHLH 107 8******************************************************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MTRNGVQSHD VSHDARNIGL ERGLNLMMNK QEALENKYTL RIKTCGNAMA DDGYKWRKYG 60 QKSIKNSPYP RSYYKCTNPR CGAKKQVERS SNEPDTFIIT YEGLHLHFAY PFITLNPPQF 120 LDQPTKKPKL TNPKAQNNEE NASEVDESPK FVNPSPTVDL EDGLGFGEIG SQGLLEDMVP 180 LMIRNPFIKP TNSYSSSCSY SSPPTSPSFS WSNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43290.1 | 5e-42 | WRKY family protein |