PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 177aa MW: 20377.4 Da PI: 9.8656 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.1 | 1.5e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri++k rqv f+kRr+g+lKKA+ELS+LCd++v v+i+s++g+l+e++s PHU06742.1 9 KRIQDKNCRQVAFCKRRKGLLKKAKELSILCDVDVGVVIISNRGRLHEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 25.3 | 6.2e-10 | 98 | 160 | 29 | 92 |
K-box 29 enLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 e Lq++ R++ e+++ + +L +Le++L ++l +iRs+K++llle+ ++l + + +++++ + PHU06742.1 98 ELLQETERQIE-ENVDGVTATDLIHLENELLTALVQIRSRKEKLLLEEKKQLENNMARMKKNRR 160 67888888876.9************************************999998888877655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MGRRKVEIKR IQDKNCRQVA FCKRRKGLLK KAKELSILCD VDVGVVIISN RGRLHEFAST 60 NSLTGILQRY ESHASAEKEI SAEIQDAESK FSSMTTGELL QETERQIEEN VDGVTATDLI 120 HLENELLTAL VQIRSRKEKL LLEEKKQLEN NMARMKKNRR VNEKSDLPQQ RVTLNFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65060.1 | 5e-32 | MIKC_MADS family protein |