PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06672.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C3H
Protein Properties Length: 372aa    MW: 42615.6 Da    PI: 5.165
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.95.4e-0689112226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 k  lC f+ + G+C  G +CkF+H+
  PHU06672.1  89 KSILCEFYKA-GQCAKGFKCKFSHD 112
                 6679**7777.*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MPPKQSKSDI AKKQKIVEDK TFGLKNKNKS KNVQKYVQSL QQNVVPKVDP KKADAKKKKE  60
EEKAREKELN ELFKVAISQP KVPLGVDPKS ILCEFYKAGQ CAKGFKCKFS HDLNVQRKGE  120
KIDIFSDKRD EDGKGTMEEW DQETLEKVVA SKSQEYNKNK PTDIVCKYFL EAVEKKQYGW  180
FWVCPNGGKE CHYRHALPPG YILKSQMKAL LQEEADKMPI EEEIDEQRAK LTSSTPLTTD  240
LFMEWKKKKM EEREANLAKE RADRAKNDRM SGRELFMSDA SWFVDDVGAY DKYEREEEPA  300
ERQKENKDSA GGEASSSTSA QTTRDGGETS RNNEVDDNYD DDDDDFDVDE LNELEASLSK  360
TSLQINEPGS RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-143C3H family protein